Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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External references
Supporting evidence
ID History
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DB built by FlyBase

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Gene: CG1888 FBgn0033421

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Gene Synonyms

Location

Primary_assembly 2R: 9,541,947-9,548,135 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 12 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1888-RC	FBtr0310032	4527	372aa	FBpp0301735	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1888-RD	FBtr0310033	2535	372aa	FBpp0301736	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1888-RB	FBtr0310031	2400	372aa	FBpp0301734	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG1888-RA	FBtr0088547	1358	372aa	FBpp0087630	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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