Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
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ID History
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DB built by FlyBase

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Gene: CG1888 FBgn0033421

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Location

Primary_assembly 2R: 9,541,947-9,548,135 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 20 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1888-RC	FBtr0310032	4527	372aa	FBpp0301735	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	NM_001273898.1 NM_001273899 NM_001273899.2 NM_001273900.1 NM_136651.2 NP_001260827.1 NP_001260828 NP_001260828.1 NP_001260829.1 NP_610495.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG1888-RD	FBtr0310033	2535	372aa	FBpp0301736	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	NM_001273898.1 NM_001273899.2 NM_001273900 NM_001273900.1 NM_136651.2 NP_001260827.1 NP_001260828.1 NP_001260829 NP_001260829.1 NP_610495.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG1888-RB	FBtr0310031	2400	372aa	FBpp0301734	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	NM_001273898 NM_001273898.1 NM_001273899.2 NM_001273900.1 NM_136651.2 NP_001260827 NP_001260827.1 NP_001260828.1 NP_001260829.1 NP_610495.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG1888-RA	FBtr0088547	1358	372aa	FBpp0087630	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWH6	NM_001273898.1 NM_001273899.2 NM_001273900.1 NM_136651 NM_136651.2 NP_001260827.1 NP_001260828.1 NP_001260829.1 NP_610495 NP_610495.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays