Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG1814 FBgn0033426

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Gene Synonyms

Location

Primary_assembly 2R: 9,577,427-9,581,847 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 150 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1814-RA	FBtr0088522	1929	548aa	FBpp0087605	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7V9 C6SV33 D0IQ94	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG1814-RB	FBtr0088523	1880	409aa	FBpp0087606	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K3S2	-	-
CG1814-RC	FBtr0088521	1673	462aa	FBpp0087604	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7V8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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