Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG12344 FBgn0033558

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Location

Primary_assembly 2R: 10,827,430-10,835,709 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 87 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12344-RA	FBtr0088246	2843	449aa	FBpp0087341	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SWZ1	NM_001299369.1 NM_136775 NM_136775.3 NP_001286298.1 NP_610619 NP_610619.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG12344-RB	FBtr0339476	2831	445aa	FBpp0308559	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF41	NM_001299368 NM_001299368.1 NM_001299370.1 NP_001286297 NP_001286297.1 NP_001286299.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
CG12344-RC	FBtr0339477	2731	449aa	FBpp0308560	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SWZ1	NM_001299369 NM_001299369.1 NM_136775.3 NP_001286298 NP_001286298.1 NP_610619.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG12344-RD	FBtr0339478	2719	445aa	FBpp0308561	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF41	NM_001299368.1 NM_001299370 NM_001299370.1 NP_001286297.1 NP_001286299 NP_001286299.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1

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Summary

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Gene-based displays