Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG13229 FBgn0033579

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Location

Primary_assembly 2R: 11,139,304-11,172,206 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 1167 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG13229-RB	FBtr0330602	2509	414aa	FBpp0303452	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JVS8	NM_001273951 NM_001273951.1 NM_001273952.1 NM_136793.1 NP_001260880 NP_001260880.1 NP_001260881.1 NP_610637.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG13229-RC	FBtr0330603	2361	414aa	FBpp0303453	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JVS8	NM_001273951.1 NM_001273952 NM_001273952.1 NM_136793.1 NP_001260880.1 NP_001260881 NP_001260881.1 NP_610637.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG13229-RA	FBtr0088206	1557	414aa	FBpp0087301	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JVS8	NM_001273951.1 NM_001273952.1 NM_136793 NM_136793.1 NP_001260880.1 NP_001260881.1 NP_610637 NP_610637.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays