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DB built by FlyBase

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Gene: CG17724 FBgn0033802

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Gene Synonyms

Location

Primary_assembly 2R: 13,176,094-13,190,086 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG17724-RE	FBtr0339516	3779	542aa	FBpp0308599	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KEP6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG17724-RD	FBtr0334468	5718	518aa	FBpp0306542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K014	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG17724-RF	FBtr0344197	5631	518aa	FBpp0310606	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K014	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG17724-RA	FBtr0087771	3412	518aa	FBpp0086884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K014	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG17724-RB	FBtr0310499	3256	518aa	FBpp0302637	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7K014	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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