Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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- Gene tree (Metazoa)
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- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG3065 FBgn0034946

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Gene Synonyms

Location

Primary_assembly 2R: 23,970,305-23,972,233 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 52 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3065-RA	FBtr0072155	1929	400aa	FBpp0072064	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2MGN0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG3065-RC	FBtr0072153	1859	378aa	FBpp0072062	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MLQ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG3065-RB	FBtr0072154	1657	400aa	FBpp0072063	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2MGN0 Q5BIG5 Q86LE8	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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