Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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- Structural variants
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DB built by FlyBase

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Gene: CG9380 FBgn0035094

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Location

Primary_assembly 2R: 25,183,628-25,255,318 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 69 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9380-RF	FBtr0333172	3550	840aa	FBpp0305375	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MLN4	NM_001274250 NM_001274250.1 NM_001274251.1 NM_166707.2 NP_001261179 NP_001261179.1 NP_001261180.1 NP_726511.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9380-RE	FBtr0333171	2989	840aa	FBpp0305374	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PVB1 C0PVB5 Q6NP37 Q8MLN4	NM_001274250.1 NM_001274251 NM_001274251.1 NM_166707.2 NP_001261179.1 NP_001261180 NP_001261180.1 NP_726511.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9380-RD	FBtr0333170	2745	840aa	FBpp0305373	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MLN4	NM_001274250.1 NM_001274251.1 NM_166707 NM_166707.2 NP_001261179.1 NP_001261180.1 NP_726511 NP_726511.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9380-RG	FBtr0333173	2668	850aa	FBpp0305376	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8V8	NM_001043106 NM_001043106.2 NP_001036571 NP_001036571.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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Gene-based displays