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DB built by FlyBase

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Gene: Hipk FBgn0035142

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Description

Homeodomain interacting protein kinase

Gene Synonyms

Location

Primary_assembly 3L: 543,060-581,099 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 36 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Hipk-RD	FBtr0479798	6104	1409aa	FBpp0428131	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q6U2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Hipk-RA	FBtr0072552	11261	1340aa	FBpp0072451	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D4RSJ1 B3DN76 Q8T038 Q95TG3 Q9W0Q1	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Hipk-RB	FBtr0072551	6287	1340aa	FBpp0072450	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0Q1	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Hipk-RC	FBtr0331786	5608	1256aa	FBpp0304171	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDR2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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