Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Orthologues
- Paralogues
Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
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DB built by FlyBase

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Gene: Nt5a FBgn0035204

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Description

5' nucleotidase A

Gene Synonyms

Location

Primary_assembly 3L: 1,304,850-1,307,418 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 70 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Nt5a-RB	FBtr0331867	2569	534aa	FBpp0304251	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961B3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Nt5a-RA	FBtr0072729	2131	534aa	FBpp0072613	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961B3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Nt5a-RC	FBtr0345006	1825	435aa	FBpp0311257	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCB6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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