HECT and RLD domain containing E3 ubiquitin ligase 4
Primary_assembly 3L: 1,313,696-1,318,330 forward strand.
BDGP6.32:AE014296.5
This gene has 3 transcripts (splice variants), 165 orthologues and 12 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Herc4-RC | FBtr0310555 | 3766 | 1062aa | FBpp0302692 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E8NHA2 | NM_001274320 NM_001274320.1 NP_001261249 NP_001261249.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Herc4-RA | FBtr0072671 | 3820 | 1058aa | FBpp0072564 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9W0H2 | NM_138254.3 NM_167868 NM_167868.2 NP_612098.2 NP_728591 NP_728591.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Herc4-RB | FBtr0072670 | 3754 | 1058aa | FBpp0072563 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8MQN4 Q9W0H2 | NM_138254 NM_138254.3 NM_167868.2 NP_612098 NP_612098.2 NP_728591.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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