Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG1246 FBgn0035360

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Location

Primary_assembly 3L: 2,648,048-2,650,205 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 22 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1246-RD	FBtr0333446	1840	437aa	FBpp0305637	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZZ0	NM_001202107.2 NM_001274407 NM_001274407.1 NM_001299994.1 NM_139479.4 NP_001189036.1 NP_001261336 NP_001261336.1 NP_001286923.1 NP_647736.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG1246-RC	FBtr0303022	1674	437aa	FBpp0292141	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZZ0	NM_001202107 NM_001202107.2 NM_001274407.1 NM_001299994.1 NM_139479.4 NP_001189036 NP_001189036.1 NP_001261336.1 NP_001286923.1 NP_647736.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG1246-RB	FBtr0072938	1649	437aa	FBpp0072815	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZZ0	NM_001202107.2 NM_001274407.1 NM_001299994.1 NM_139479 NM_139479.4 NP_001189036.1 NP_001261336.1 NP_001286923.1 NP_647736 NP_647736.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG1246-RE	FBtr0345027	1527	437aa	FBpp0311277	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZZ0	NM_001202107.2 NM_001274407.1 NM_001299994 NM_001299994.1 NM_139479.4 NP_001189036.1 NP_001261336.1 NP_001286923 NP_001286923.1 NP_647736.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays