Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG2162 FBgn0035388

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Location

Primary_assembly 3L: 3,035,196-3,040,469 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 107 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG2162-RA	FBtr0072981	2580	535aa	FBpp0072851	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZW2	NM_139503 NM_139503.3 NP_647760 NP_647760.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG2162-RE	FBtr0345028	2580	662aa	FBpp0311278	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIB4	NM_001169861 NM_001169861.2 NP_001163332 NP_001163332.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical
CG2162-RF	FBtr0345029	1669	315aa	FBpp0311279	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MRH9	NM_001274420 NM_001274420.2 NP_001261349 NP_001261349.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays