Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG11357 FBgn0035558

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Location

Primary_assembly 3L: 4,542,051-4,553,457 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 130 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG11357-RC	FBtr0113143	3080	434aa	FBpp0112056	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZA6	NM_001104035.2 NM_001104036 NM_001104036.3 NM_001259697.2 NM_139659.3 NP_001097505.1 NP_001097506 NP_001097506.1 NP_001246626.1 NP_647916.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11357-RA	FBtr0073310	2686	434aa	FBpp0073166	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZA6	NM_001104035.2 NM_001104036.3 NM_001259697.2 NM_139659 NM_139659.3 NP_001097505.1 NP_001097506.1 NP_001246626.1 NP_647916 NP_647916.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11357-RD	FBtr0304987	2611	434aa	FBpp0293524	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZA6	NM_001104035.2 NM_001104036.3 NM_001259697 NM_001259697.2 NM_139659.3 NP_001097505.1 NP_001097506.1 NP_001246626 NP_001246626.1 NP_647916.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11357-RB	FBtr0113142	2326	434aa	FBpp0112055	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZA6	NM_001104035 NM_001104035.2 NM_001104036.3 NM_001259697.2 NM_139659.3 NP_001097505 NP_001097505.1 NP_001097506.1 NP_001246626.1 NP_647916.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays