Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: upSET FBgn0036398

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Description

upSET

Gene Synonyms

Location

Primary_assembly 3L: 14,002,127-14,020,148 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants) and 146 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
upSET-RB	FBtr0333050	12737	3146aa	FBpp0305264	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VUB5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
upSET-RA	FBtr0075768	12659	3146aa	FBpp0075510	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0K2 Q9VUB5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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