Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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External references
Supporting evidence
ID History
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DB built by FlyBase

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Gene: CG16959 FBgn0036481

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Location

Primary_assembly 3L: 15,119,878-15,125,321 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 63 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG16959-RA	FBtr0075655	2292	503aa	FBpp0075408	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VUL4	NM_140493 NM_140493.4 NM_168608.3 NP_648750 NP_648750.1 NP_730025.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG16959-RB	FBtr0075656	2092	503aa	FBpp0075409	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VUL4	NM_140493.4 NM_168608 NM_168608.3 NP_648750.1 NP_730025 NP_730025.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG16959-RC	FBtr0303378	2043	489aa	FBpp0292440	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFB1	NM_001202180 NM_001202180.2 NM_001274941.1 NM_001300140.1 NP_001189109 NP_001189109.1 NP_001261870.1 NP_001287069.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG16959-RE	FBtr0344235	1866	489aa	FBpp0310639	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFB1	NM_001202180.2 NM_001274941.1 NM_001300140 NM_001300140.1 NP_001189109.1 NP_001261870.1 NP_001287069 NP_001287069.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG16959-RD	FBtr0333935	1843	489aa	FBpp0306063	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFB1	NM_001202180.2 NM_001274941 NM_001274941.1 NM_001300140.1 NP_001189109.1 NP_001261870 NP_001261870.1 NP_001287069.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays