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DB built by FlyBase

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Gene: Agpat3 FBgn0036623

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Description

1-Acylglycerol-3-phosphate O-acyltransferase 3

Gene Synonyms

Location

Primary_assembly 3L: 16,381,772-16,385,957 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 5 transcripts (splice variants), 187 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Agpat3-RE	FBtr0308819	1849	397aa	FBpp0300976	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5AEK7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Agpat3-RC	FBtr0075418	1676	386aa	FBpp0075176	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VV51	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Agpat3-RB	FBtr0075419	1672	386aa	FBpp0075177	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VV51	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Agpat3-RA	FBtr0075417	1605	386aa	FBpp0075175	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VV51	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Agpat3-RD	FBtr0075420	845	143aa	FBpp0075178	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961F9	-	-

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Summary

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