Summary
- Splice variants
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DB built by FlyBase

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Gene: AstC-R2 FBgn0036789

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Description

Allatostatin C receptor 2

Gene Synonyms

Location

Primary_assembly 3L: 18,485,137-18,502,557 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 181 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AstC-R2-RF	FBtr0346968	3735	593aa	FBpp0312429	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0WMT8 A4IJ48 Q8MTX9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
AstC-R2-RE	FBtr0332867	3735	549aa	FBpp0305089	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQS9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AstC-R2-RD	FBtr0330088	2370	567aa	FBpp0303121	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFL7 Q8I943	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
AstC-R2-RB	FBtr0089387	2370	549aa	FBpp0088996	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQS9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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