Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: Chmp1 FBgn0036805

.

Description

Charged multivesicular body protein 1

Gene Synonyms

Location

Primary_assembly 3L: 18,682,895-18,684,061 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 158 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Chmp1-RB	FBtr0345383	1096	203aa	FBpp0311533	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95SH2	NM_001300179 NM_001300179.1 NM_140794.3 NP_001287108 NP_001287108.1 NP_649051.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Chmp1-RA	FBtr0075092	847	203aa	FBpp0074859	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95SH2	NM_001300179.1 NM_140794 NM_140794.3 NP_001287108.1 NP_649051 NP_649051.3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.