Summary
- Splice variants
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Metazoan Compara
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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DB built by FlyBase

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Gene: CG9368 FBgn0036890

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Location

Primary_assembly 3L: 19,601,633-19,604,120 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 10 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9368-RA	FBtr0074944	1828	182aa	FBpp0074712	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VW17	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG9368-RD	FBtr0336786	2423	87aa	FBpp0307762	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFX7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG9368-RB	FBtr0074942	1813	177aa	FBpp0074710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MYU6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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