Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: atk FBgn0036995

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Description

artichoke

Location

Primary_assembly 3L: 20,454,690-20,464,862 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 55 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
atk-RA	FBtr0078223	5071	1535aa	FBpp0077881	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPF0	NM_001275184.1 NM_001275185.1 NM_140971 NM_140971.1 NP_001262113.1 NP_001262114.1 NP_649228 NP_649228.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
atk-RC	FBtr0331570	4873	1535aa	FBpp0303960	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPF0	NM_001275184.1 NM_001275185 NM_001275185.1 NM_140971.1 NP_001262113.1 NP_001262114 NP_001262114.1 NP_649228.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
atk-RB	FBtr0331569	4756	1535aa	FBpp0303959	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPF0	NM_001275184 NM_001275184.1 NM_001275185.1 NM_140971.1 NP_001262113 NP_001262113.1 NP_001262114.1 NP_649228.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays