Primary_assembly 3L: 21,281,752-21,285,962 reverse strand.
BDGP6.32:AE014296.5
This gene has 4 transcripts (splice variants) and 46 orthologues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
CG12974-RD | FBtr0345804 | 1844 | 363aa | FBpp0311790 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KTW4 | NM_001300210 NM_001300210.1 NM_168895.3 NP_001287139 NP_001287139.1 NP_730613.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
CG12974-RC | FBtr0332860 | 1972 | 330aa | FBpp0305082 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VP58 | NM_001275213 NM_001275213.1 NM_141039.1 NP_001262142 NP_001262142.1 NP_649296.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
CG12974-RB | FBtr0078411 | 1606 | 363aa | FBpp0078065 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KTW4 Q8MRA7 | NM_001300210.1 NM_168895 NM_168895.3 NP_001287139.1 NP_730613 NP_730613.2 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
CG12974-RA | FBtr0078410 | 1442 | 330aa | FBpp0078064 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VP58 | NM_001275213.1 NM_141039 NM_141039.1 NP_001262142.1 NP_649296 NP_649296.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |