Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: Sccpdh1 FBgn0037298

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Description

Saccheropin dehydrogenase 1

Gene Synonyms

Location

Primary_assembly 3R: 5,221,632-5,223,365 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 214 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Sccpdh1-RB	FBtr0078830	1636	430aa	FBpp0078472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VN86	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Sccpdh1-RC	FBtr0078829	1631	430aa	FBpp0078471	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VN86	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Sccpdh1-RA	FBtr0078828	1581	430aa	FBpp0078470	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VN86	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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