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DB built by FlyBase

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Gene: Pi4KIIalpha FBgn0037339

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Description

Phosphatidylinositol 4-kinase II alpha

Gene Synonyms

Location

Primary_assembly 3R: 5,557,663-5,563,652 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pi4KIIalpha-RA	FBtr0078756	3122	710aa	FBpp0089178	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6W4K4 Q8STF7 Q9VND3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Pi4KIIalpha-RC	FBtr0078757	3095	710aa	FBpp0089179	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VND3	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Pi4KIIalpha-RE	FBtr0479746	2718	480aa	FBpp0428089	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6F7SG83	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pi4KIIalpha-RB	FBtr0078755	2565	563aa	FBpp0078404	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I0B7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Pi4KIIalpha-RF	FBtr0479926	2044	457aa	FBpp0428258	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EES5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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