Summary
- Splice variants
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DB built by FlyBase

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Gene: CG9626 FBgn0037565

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Gene Synonyms

Location

Primary_assembly 3R: 8,293,843-8,300,978 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 41 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9626-RB	FBtr0306805	5550	1667aa	FBpp0297717	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHT6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG9626-RC	FBtr0306806	5535	1667aa	FBpp0297718	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHT6	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG9626-RD	FBtr0332541	5481	1644aa	FBpp0304808	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGG1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG9626-RA	FBtr0081864	5440	1667aa	FBpp0081353	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VHT6	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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