Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG5961 FBgn0038056

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Location

Primary_assembly 3R: 12,458,421-12,460,294 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 104 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5961-RA	FBtr0082681	1658	442aa	FBpp0082149	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VG61	NM_001202282.1 NM_001300378.1 NM_141949 NM_141949.4 NP_001189211.1 NP_001287307.1 NP_650206 NP_650206.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5961-RC	FBtr0340187	1653	442aa	FBpp0309164	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VG61	NM_001202282.1 NM_001300378 NM_001300378.1 NM_141949.4 NP_001189211.1 NP_001287307 NP_001287307.1 NP_650206.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5961-RB	FBtr0303029	1463	442aa	FBpp0292148	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VG61	NM_001202282 NM_001202282.1 NM_001300378.1 NM_141949.4 NP_001189211 NP_001189211.1 NP_001287307.1 NP_650206.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays