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DB built by FlyBase

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Gene: Task6 FBgn0038165

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Description

TWIK-related acid-sensitive K[+] channel 6

Gene Synonyms

Location

Primary_assembly 3R: 13,667,046-13,674,542 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 106 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Task6-RF	FBtr0334494	4932	408aa	FBpp0306561	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VFS9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Task6-RE	FBtr0334493	4899	397aa	FBpp0306560	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFZ5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Task6-RD	FBtr0334492	3851	397aa	FBpp0306559	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFZ5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Task6-RC	FBtr0301654	3724	408aa	FBpp0290868	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q058Y1 Q9VFS9	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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