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Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: ema FBgn0038427

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Description

endosomal maturation defective

Gene Synonyms

Location

Primary_assembly 3R: 16,436,880-16,441,661 reverse strand.

BDGP6.54:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 79 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ema-RA	FBtr0083315	3590	1067aa	FBpp0082766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VEV4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ema-RC	FBtr0337017	3473	1028aa	FBpp0307946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH88	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ema-RB	FBtr0100643	3383	998aa	FBpp0100104	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BIH5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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