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DB built by FlyBase

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Gene: Octalpha2R FBgn0038653

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Description

alpha2-adrenergic-like octopamine receptor

Gene Synonyms

Location

Primary_assembly 3R: 18,799,280-18,849,224 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 137 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Octalpha2R-RB	FBtr0330029	9804	740aa	FBpp0303062	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHD0	NM_001275786 NM_001275786.2 NP_001262715 NP_001262715.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Octalpha2R-RA	FBtr0083677	9804	699aa	FBpp0083092	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L4T9 Q9VE32	NM_142497 NM_142497.5 NP_650754 NP_650754.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Octalpha2R-RC	FBtr0332809	9717	670aa	FBpp0305032	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHQ6	NM_001275785 NM_001275785.2 NP_001262714 NP_001262714.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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