Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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Supporting evidence
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DB built by FlyBase

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Gene: Ice2 FBgn0038860

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Description

Interacts with the C terminus of ELL 2

Gene Synonyms

Location

Primary_assembly 3R: 21,130,216-21,132,720 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants) and 13 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ice2-RA	FBtr0084015	2505	684aa	FBpp0083418	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SZZ8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Ice2-RC	FBtr0113258	2350	394aa	FBpp0112170	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGQ6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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