Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Structural variants
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External references
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DB built by FlyBase

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Gene: ETHR FBgn0038874

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Description

ETHR

Gene Synonyms

Location

Primary_assembly 3R: 21,247,011-21,265,134 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 192 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ETHR-RC	FBtr0339194	3397	471aa	FBpp0308331	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VDC4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ETHR-RA	FBtr0084054	3390	471aa	FBpp0083456	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7FNL8 D3DN09 Q86RL0 Q9VDC4	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ETHR-RB	FBtr0084053	2716	461aa	FBpp0083455	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86C62 Q86RK9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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