Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG5849 FBgn0038897

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Location

Primary_assembly 3R: 21,740,105-21,744,431 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 241 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5849-RA	FBtr0084125	3042	968aa	FBpp0083523	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MZ08 Q9VD87	NM_142722 NM_142722.1 NP_650979 NP_650979.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5849-RB	FBtr0301164	3063	449aa	FBpp0290387	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIS5	NM_001170208 NM_001170208.2 NP_001163679 NP_001163679.1	-

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Summary

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Gene-based displays