Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG5380 FBgn0038951

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Location

Primary_assembly 3R: 22,366,080-22,367,373 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants) and 102 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5380-RB	FBtr0305320	1102	293aa	FBpp0293863	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5SHN0 Q9VD25	NM_001260308 NM_001260308.1 NM_142772.1 NP_001247237 NP_001247237.1 NP_651029.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5380-RA	FBtr0084236	1022	293aa	FBpp0083629	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5SHN0 Q9VD25	NM_001260308.1 NM_142772 NM_142772.1 NP_001247237.1 NP_651029 NP_651029.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays