Summary
- Splice variants
- Transcript comparison
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Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG7059 FBgn0038957

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Gene Synonyms

Location

Primary_assembly 3R: 22,389,780-22,392,349 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 85 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG7059-RA	FBtr0084219	1332	267aa	FBpp0083616	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T8W6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG7059-RD	FBtr0084221	1261	262aa	FBpp0083618	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BN6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG7059-RC	FBtr0084220	1238	253aa	FBpp0083617	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BN5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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