Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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DB built by FlyBase

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Gene: CG6726 FBgn0039049

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Gene Synonyms

Location

Primary_assembly 3R: 23,091,724-23,095,184 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 169 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG6726-RC	FBtr0344300	2911	401aa	FBpp0310703	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCR2	NM_001300549 NM_001300549.1 NM_142863.2 NM_170048.3 NP_001287478 NP_001287478.1 NP_651120.1 NP_732822.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG6726-RA	FBtr0084349	1473	401aa	FBpp0083742	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JUX5 Q9VCR2	NM_001300549.1 NM_142863 NM_142863.2 NM_170048.3 NP_001287478.1 NP_651120 NP_651120.1 NP_732822.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG6726-RB	FBtr0084348	1420	401aa	FBpp0083741	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCR2	NM_001300549.1 NM_142863.2 NM_170048 NM_170048.3 NP_001287478.1 NP_651120.1 NP_732822 NP_732822.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays