Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: CG4467 FBgn0039064

.

Gene Synonyms

Location

Primary_assembly 3R: 23,227,727-23,248,903 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 165 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG4467-RB	FBtr0110801	6764	1125aa	FBpp0110098	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0KI25 Q6NNV4	NM_001043282 NM_001043282.2 NP_001036747 NP_001036747.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG4467-RA	FBtr0084390	6575	1088aa	FBpp0083782	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A075QAN7 Q7YU41 Q9VCP4	NM_142876 NM_142876.4 NP_651133 NP_651133.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Summary

.

.

Gene-based displays