Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: Lsd-1 FBgn0039114

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Location

Chromosome 3R: 23,763,857-23,766,662 forward strand.

BDGP6.28:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 68 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0084456	1813	405aa	FBpp0083847	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHZ1	NM_001275954.1 NM_142926.4 NP_001262883.1 NP_651183.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0084455	1510	431aa	FBpp0083846	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E4NKM5 I0B1Q0 Q9VCI3	NM_001275954.1 NM_142926.4 NM_170092.3 NM_170093.3 NP_001262883.1 NP_651183.3 NP_732904.2 NP_732905.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0084457	1501	325aa	FBpp0083848	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_170093.3 NP_732905.2
-	FBtr0335002	1432	405aa	FBpp0307010	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHZ1	NM_001275954.1 NM_142926.4 NP_001262883.1 NP_651183.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays