Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: CG5746 FBgn0039186

.

Location

Primary_assembly 3R: 24,343,895-24,348,791 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 7 transcripts (splice variants) and 15 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5746-RG	FBtr0334603	4498	454aa	FBpp0306670	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHS5	NM_001275985 NM_001275985.1 NP_001262914 NP_001262914.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG5746-RC	FBtr0273282	2679	480aa	FBpp0271790	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGI0	NM_001144634 NM_001144634.2 NM_001144635.2 NP_001138106 NP_001138106.1 NP_001138107.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG5746-RF	FBtr0334602	2661	474aa	FBpp0306669	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KI02	NM_001275984 NM_001275984.1 NP_001262913 NP_001262913.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG5746-RB	FBtr0084630	2610	457aa	FBpp0084014	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RR2 Q9VC90	NM_142991.3 NM_170140 NM_170140.2 NP_651248.2 NP_732983 NP_732983.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG5746-RE	FBtr0334601	2592	451aa	FBpp0306668	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHD9 Q95RR2	NM_001275983 NM_001275983.1 NP_001262912 NP_001262912.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG5746-RD	FBtr0273283	2581	480aa	FBpp0271791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGI0	NM_001144634.2 NM_001144635 NM_001144635.2 NP_001138106.1 NP_001138107 NP_001138107.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG5746-RA	FBtr0084631	2509	457aa	FBpp0084015	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VC90	NM_142991 NM_142991.3 NM_170140.2 NP_651248 NP_651248.2 NP_732983.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

.

Summary

.

.

Gene-based displays