Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
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Genetic Variation
- Variant table
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- Structural variants
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DB built by FlyBase

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Gene: CG5768 FBgn0039198

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Gene Synonyms

Location

Primary_assembly 3R: 24,386,104-24,390,339 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 79 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5768-RE	FBtr0479754	1230	397aa	FBpp0428097	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EF03	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG5768-RC	FBtr0334917	825	262aa	FBpp0306937	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95RF9 Q9VC77	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG5768-RD	FBtr0334918	825	262aa	FBpp0306938	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QCY8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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