Summary
- Splice variants
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Metazoan Compara
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- GO: Cellular component
- GO: Molecular function
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DB built by FlyBase

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Gene: Nct FBgn0039234

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Description

Nicastrin

Gene Synonyms

Location

Primary_assembly 3R: 24,851,601-24,854,869 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 155 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Nct-RE	FBtr0334570	2631	699aa	FBpp0306637	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHG2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Nct-RC	FBtr0301865	2768	695aa	FBpp0291079	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIV8 Q9VC27	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nct-RD	FBtr0306087	2606	692aa	FBpp0297224	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KS07	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nct-RA	FBtr0084705	2409	695aa	FBpp0084083	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIV8 Q9VC27	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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