Cadherin 96Cb
Primary_assembly 3R: 25,224,156-25,232,321 reverse strand.
BDGP6.32:AE014297.3
This gene has 3 transcripts (splice variants), 157 orthologues and 10 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Cad96Cb-RD | FBtr0339260 | 3003 | 789aa | FBpp0308367 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4LHM7 | NM_001300595 NM_001300595.1 NP_001287524 NP_001287524.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Cad96Cb-RB | FBtr0301090 | 3016 | 786aa | FBpp0290312 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VBV6 | NM_143098 NM_143098.4 NP_651355 NP_651355.3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Cad96Cb-RC | FBtr0302299 | 2991 | 785aa | FBpp0291505 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C6SUV2 Q4V441 | NM_001170256 NM_001170256.1 NP_001163727 NP_001163727.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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