Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG5890 FBgn0039380

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Location

Primary_assembly 3R: 25,856,154-25,872,670 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 123 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5890-RD	FBtr0339159	4649	206aa	FBpp0308303	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4P1SAA7 Q1WWA7 Q9VBL2	NM_001170268.2 NM_001300605 NM_001300605.1 NM_143179.2 NP_001163739.2 NP_001287534 NP_001287534.1 NP_651436.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5890-RC	FBtr0339158	1433	206aa	FBpp0308302	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4P1SAA7 Q9VBL2	NM_001170268 NM_001170268.2 NM_001300605.1 NM_143179.2 NP_001163739 NP_001163739.2 NP_001287534.1 NP_651436.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG5890-RE	FBtr0474233	1433	229aa	FBpp0423186	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VBL2	NM_001370037

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Summary

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Gene-based displays