Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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Genetic Variation
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DB built by FlyBase

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Gene: CROT FBgn0039543

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Location

Chromosome 3R: 27,703,379-27,706,751 reverse strand.

BDGP6.28:AE014297.3

About this gene

This gene has 6 transcripts (splice variants), 88 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0452077	2651	618aa	FBpp0402837	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SWX9 Q9VB02	NM_001347745.1 NM_001347746.1 NM_170351.2 NM_170352.3 NM_170353.3 NM_170354.3 NP_001334704.1 NP_001334705.1 NP_733230.1 NP_733231.1 NP_733232.1 NP_733233.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0085240	2476	618aa	FBpp0084609	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VB02	NM_001347745.1 NM_001347746.1 NM_170351.2 NM_170352.3 NM_170353.3 NM_170354.3 NP_001334704.1 NP_001334705.1 NP_733230.1 NP_733231.1 NP_733232.1 NP_733233.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0085236	2409	618aa	FBpp0084605	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VB02	NM_001347745.1 NM_001347746.1 NM_170351.2 NM_170352.3 NM_170353.3 NM_170354.3 NP_001334704.1 NP_001334705.1 NP_733230.1 NP_733231.1 NP_733232.1 NP_733233.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0085238	2357	618aa	FBpp0084607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VB02	NM_001347745.1 NM_001347746.1 NM_170351.2 NM_170352.3 NM_170353.3 NM_170354.3 NP_001334704.1 NP_001334705.1 NP_733230.1 NP_733231.1 NP_733232.1 NP_733233.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0085239	2334	618aa	FBpp0084608	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VB02	NM_001347745.1 NM_001347746.1 NM_170351.2 NM_170352.3 NM_170353.3 NM_170354.3 NP_001334704.1 NP_001334705.1 NP_733230.1 NP_733231.1 NP_733232.1 NP_733233.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0452076	2281	618aa	FBpp0402836	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VB02	NM_001347745.1 NM_001347746.1 NM_170351.2 NM_170352.3 NM_170353.3 NM_170354.3 NP_001334704.1 NP_001334705.1 NP_733230.1 NP_733231.1 NP_733232.1 NP_733233.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays