snustorr
Primary_assembly 3R: 28,675,041-28,695,939 forward strand.
BDGP6.32:AE014297.3
This gene has 6 transcripts (splice variants), 171 orthologues and 2 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
snu-RA | FBtr0085308 | 3746 | 808aa | FBpp0084677 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VAU1 | NM_143371 NM_143371.2 NP_651628 NP_651628.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
snu-RB | FBtr0085309 | 3802 | 777aa | FBpp0084678 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q86LC8 Q8IMM1 | NM_170376 NM_170376.1 NP_733255 NP_733255.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
snu-RD | FBtr0303343 | 3760 | 763aa | FBpp0292406 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4JD13 | NM_001202376 NM_001202376.1 NP_001189305 NP_001189305.1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
snu-RG | FBtr0336787 | 3586 | 764aa | FBpp0307763 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KHS4 | NM_001276111 NM_001276111.1 NP_001263040 NP_001263040.1 | - |
snu-RF | FBtr0305088 | 3555 | 775aa | FBpp0293625 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B9EQW2 | NM_001260422 NM_001260422.1 NP_001247351 NP_001247351.1 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
snu-RE | FBtr0305087 | 3145 | 766aa | FBpp0293624 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K7B3 | NM_001260421 NM_001260421.1 NP_001247350 NP_001247350.1 | - |