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DB built by FlyBase

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Gene: Prtl99C FBgn0039707

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Description

Protamine-like 99C

Gene Synonyms

Location

Primary_assembly 3R: 29,835,950-29,837,447 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Prtl99C-RB	FBtr0301745	1053	201aa	FBpp0290959	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VAF7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Prtl99C-RD	FBtr0339143	769	201aa	FBpp0308288	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VAF7	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Prtl99C-RC	FBtr0301746	745	193aa	FBpp0290960	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJ16	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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