Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG12567 FBgn0039958

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Location

Primary_assembly 2L: 23,161,122-23,174,484 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 6 transcripts (splice variants), 143 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12567-RA	FBtr0113704	2144	349aa	FBpp0112427	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7PLS1	NM_001015384 NM_001015384.3 NM_001300704.1 NP_001015384 NP_001015384.1 NP_001287633.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG12567-RE	FBtr0300703	2196	75aa	FBpp0289927	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2A6J3	NM_001170363 NM_001170363.2 NP_001163834 NP_001163834.1	-
CG12567-RC	FBtr0113705	2134	70aa	FBpp0112428	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8Y4U4	NM_001110861 NM_001110861.3 NP_001104331 NP_001104331.1	-
CG12567-RG	FBtr0344847	1907	349aa	FBpp0311162	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E6PBW2 F2FBA2 Q7PLS1	NM_001015384.3 NM_001300704 NM_001300704.1 NP_001015384.1 NP_001287633 NP_001287633.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG12567-RF	FBtr0300704	1885	341aa	FBpp0289928	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SZ06	NM_001015383 NM_001015383.2 NP_001015383 NP_001015383.3	-
CG12567-RD	FBtr0300702	1875	335aa	FBpp0289926	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2A6J2	NM_001170362 NM_001170362.1 NP_001163833 NP_001163833.1	-

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Summary

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