Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: Set1 FBgn0040022

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Description

SET domain containing 1

Location

Primary_assembly 3L: 25,107,594-25,115,180 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 9 transcripts (splice variants), 123 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Set1-RC	FBtr0113870	5495	1641aa	FBpp0112593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222.3 NM_001110936 NM_001110936.3 NM_001170375.2 NM_001170376.2 NM_001170377.1 NM_001170378.1 NM_001170379.1 NM_001170380.2 NP_001015221.1 NP_001015222.1 NP_001104406 NP_001104406.1 NP_001163846.1 NP_001163847.1 NP_001163848.1 NP_001163849.1 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RB	FBtr0113871	5486	1641aa	FBpp0112594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222 NM_001015222.3 NM_001110936.3 NM_001170375.2 NM_001170376.2 NM_001170377.1 NM_001170378.1 NM_001170379.1 NM_001170380.2 NP_001015221.1 NP_001015222 NP_001015222.1 NP_001104406.1 NP_001163846.1 NP_001163847.1 NP_001163848.1 NP_001163849.1 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RE	FBtr0302244	5326	1641aa	FBpp0291453	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222.3 NM_001110936.3 NM_001170375.2 NM_001170376 NM_001170376.2 NM_001170377.1 NM_001170378.1 NM_001170379.1 NM_001170380.2 NP_001015221.1 NP_001015222.1 NP_001104406.1 NP_001163846.1 NP_001163847 NP_001163847.1 NP_001163848.1 NP_001163849.1 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RI	FBtr0302248	5317	1641aa	FBpp0291457	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222.3 NM_001110936.3 NM_001170375.2 NM_001170376.2 NM_001170377.1 NM_001170378.1 NM_001170379.1 NM_001170380 NM_001170380.2 NP_001015221.1 NP_001015222.1 NP_001104406.1 NP_001163846.1 NP_001163847.1 NP_001163848.1 NP_001163849.1 NP_001163850.1 NP_001163851 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RD	FBtr0302243	5311	1641aa	FBpp0291452	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222.3 NM_001110936.3 NM_001170375 NM_001170375.2 NM_001170376.2 NM_001170377.1 NM_001170378.1 NM_001170379.1 NM_001170380.2 NP_001015221.1 NP_001015222.1 NP_001104406.1 NP_001163846 NP_001163846.1 NP_001163847.1 NP_001163848.1 NP_001163849.1 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RA	FBtr0113869	5303	1641aa	FBpp0112592	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221 NM_001015221.3 NM_001015222.3 NM_001110936.3 NM_001170375.2 NM_001170376.2 NM_001170377.1 NM_001170378.1 NM_001170379.1 NM_001170380.2 NP_001015221 NP_001015221.1 NP_001015222.1 NP_001104406.1 NP_001163846.1 NP_001163847.1 NP_001163848.1 NP_001163849.1 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RF	FBtr0302245	5290	1641aa	FBpp0291454	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222.3 NM_001110936.3 NM_001170375.2 NM_001170376.2 NM_001170377 NM_001170377.1 NM_001170378.1 NM_001170379.1 NM_001170380.2 NP_001015221.1 NP_001015222.1 NP_001104406.1 NP_001163846.1 NP_001163847.1 NP_001163848 NP_001163848.1 NP_001163849.1 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RG	FBtr0302246	5279	1641aa	FBpp0291455	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222.3 NM_001110936.3 NM_001170375.2 NM_001170376.2 NM_001170377.1 NM_001170378 NM_001170378.1 NM_001170379.1 NM_001170380.2 NP_001015221.1 NP_001015222.1 NP_001104406.1 NP_001163846.1 NP_001163847.1 NP_001163848.1 NP_001163849 NP_001163849.1 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Set1-RH	FBtr0302247	5276	1641aa	FBpp0291456	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	NM_001015221.3 NM_001015222.3 NM_001110936.3 NM_001170375.2 NM_001170376.2 NM_001170377.1 NM_001170378.1 NM_001170379 NM_001170379.1 NM_001170380.2 NP_001015221.1 NP_001015222.1 NP_001104406.1 NP_001163846.1 NP_001163847.1 NP_001163848.1 NP_001163849.1 NP_001163850 NP_001163850.1 NP_001163851.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays