Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: Set1 FBgn0040022

.

Description

SET domain containing 1

Gene Synonyms

Location

Primary_assembly 3L: 25,107,594-25,115,180 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 9 transcripts (splice variants), 74 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Set1-RC	FBtr0113870	5495	1641aa	FBpp0112593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RB	FBtr0113871	5486	1641aa	FBpp0112594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RE	FBtr0302244	5326	1641aa	FBpp0291453	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RI	FBtr0302248	5317	1641aa	FBpp0291457	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RD	FBtr0302243	5311	1641aa	FBpp0291452	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RA	FBtr0113869	5303	1641aa	FBpp0112592	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RF	FBtr0302245	5290	1641aa	FBpp0291454	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RG	FBtr0302246	5279	1641aa	FBpp0291455	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Set1-RH	FBtr0302247	5276	1641aa	FBpp0291456	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5LJZ2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.