Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: SMC1 FBgn0040283

.

Description

Structural maintenance of chromosomes 1

Gene Synonyms

Location

Primary_assembly 3R: 24,058,287-24,062,815 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 1 transcript (splice variant), 152 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SMC1-RA	FBtr0084541	3924	1238aa	FBpp0083926	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6UXV6 B6UXV9 B6UXW2 B6UXW7 B6UXW9 B6UXX0 B6UXX3 B6UXX7 Q9N6I4 Q9VCD8	NM_142954 NM_142954.4 NP_651211 NP_651211.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.

Gene-based displays