Summary
- Splice variants
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DB built by FlyBase

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Gene: rols FBgn0041096

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Description

rolling pebbles

Gene Synonyms

Location

Primary_assembly 3L: 12,008,225-12,064,859 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 9 transcripts (splice variants) and 154 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
rols-RB	FBtr0076053	6275	1900aa	FBpp0075785	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WS24 Q8WTD2 Q9VTS9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
rols-RD	FBtr0076054	6026	1569aa	FBpp0075786	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTS8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rols-RG	FBtr0310010	5972	1799aa	FBpp0301716	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PF75	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rols-RI	FBtr0334110	5969	1798aa	FBpp0306230	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PC91	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rols-RE	FBtr0076055	5849	1670aa	FBpp0075787	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTS6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rols-RF	FBtr0310009	5846	1669aa	FBpp0301715	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFC6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rols-RC	FBtr0076057	5832	1670aa	FBpp0075789	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WS23 Q9VTS6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rols-RA	FBtr0076056	5505	1569aa	FBpp0075788	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WTD1 Q9VTS8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
rols-RH	FBtr0334109	5502	1568aa	FBpp0306229	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PI28	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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