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DB built by FlyBase

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Gene: SCAR FBgn0041781

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Description

SCAR

Location

Primary_assembly 2L: 10,976,772-10,982,395 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 6 transcripts (splice variants) and 121 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SCAR-RD	FBtr0329949	3118	674aa	FBpp0302981	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2FB81	NM_001273439 NM_001273439.2 NP_001260368 NP_001260368.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
SCAR-RF	FBtr0340223	3037	647aa	FBpp0309198	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J5L4	NM_001298895 NM_001298895.1 NP_001285824 NP_001285824.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
SCAR-RC	FBtr0305256	2914	640aa	FBpp0293780	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NCT2	NM_001259038 NM_001259038.3 NP_001245967 NP_001245967.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
SCAR-RE	FBtr0329950	2833	632aa	FBpp0302982	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCP4	NM_001273440 NM_001273440.2 NP_001260369 NP_001260369.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
SCAR-RB	FBtr0305255	2815	641aa	FBpp0293779	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1C3C5 H5V8D0	NM_001259037 NM_001259037.3 NP_001245966 NP_001245966.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
SCAR-RA	FBtr0080148	2292	613aa	FBpp0079737	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKM2	NM_135633 NM_135633.4 NP_609477 NP_609477.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays