Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG17239 FBgn0042186

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Location

Primary_assembly 2L: 2,251,510-2,252,341 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 29 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG17239-RB	FBtr0335163	832	248aa	FBpp0307159	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQ98	NM_001272991 NM_001272991.1 NM_164469.2 NP_001259920 NP_001259920.1 NP_722784.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG17239-RA	FBtr0077805	770	248aa	FBpp0077482	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7DYV9 A7DZ09 A7DZ10 A7DZ11 A7DZ13 A7DZ14 Q0GSU5 Q4V675 Q9VQ98	NM_001272991.1 NM_164469 NM_164469.2 NP_001259920.1 NP_722784 NP_722784.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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